Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-SCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
118039 bp
Thymine Count
117524 bp
Guanine Count
108052 bp
Cytosine Count
108269 bp
Genome Length
451884 bp
Protein-coding Genes
4973 genes
Non-Coding Genes
282 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| d-lactate dehydrogenase | E0F20_17940 | Not Available | Positive | 3642846 - 3644555 | 64299.6 |
| d-alanyl-d-alanine endopeptidase | E0F20_17945 | Not Available | Negative | 3644620 - 3645567 | 34251.8 |
| yip1 family protein | E0F20_17950 | Not Available | Negative | 3645748 - 3646335 | 21631.9 |
| deda family protein | E0F20_17955 | Not Available | Positive | 3646578 - 3647147 | 21013.4 |
| multidrug resistance outer membrane protein mdtq | E0F20_17960 | Not Available | Negative | 3647185 - 3648624 | 52198.4 |
| lysr family transcriptional regulator | E0F20_17965 | Not Available | Positive | 3648761 - 3649665 | 33409.7 |
| rok family transcriptional regulator | E0F20_17970 | Not Available | Positive | 3649784 - 3651004 | 44163.7 |
| atp-dependent dethiobiotin synthetase biod | E0F20_17975 | Not Available | Positive | 3651130 - 3651825 | 24688.0 |
| voltage-gated clc-type chloride channel clcb | E0F20_17980 | Not Available | Negative | 3651781 - 3653070 | 45341.6 |
| tat proofreading chaperone dmsd | E0F20_17985 | Not Available | Negative | 3653190 - 3653804 | 23321.5 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

