Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-SCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
118039 bp
Thymine Count
117524 bp
Guanine Count
108052 bp
Cytosine Count
108269 bp
Genome Length
451884 bp
Protein-coding Genes
4973 genes
Non-Coding Genes
282 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 50s ribosomal protein l3 n(5)-glutamine methyltransferase | E0F20_17740 | Not Available | Positive | 3597436 - 3598368 | 35162.7 |
| chorismate synthase | E0F20_17745 | Not Available | Positive | 3598408 - 3599493 | 39098.8 |
| penicillin-insensitive murein endopeptidase | E0F20_17750 | Not Available | Positive | 3599497 - 3600321 | 30216.4 |
| hypothetical protein | E0F20_17755 | Not Available | Positive | 3600321 - 3601130 | 28617.1 |
| elongation factor p hydroxylase | E0F20_17760 | Not Available | Positive | 3601130 - 3601678 | 21334.9 |
| yfcl family protein | E0F20_17765 | Not Available | Positive | 3601711 - 3601986 | 9969.63 |
| bifunctional trna (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase mnmd/fad-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase mnmc | E0F20_17770 | Not Available | Negative | 3602101 - 3604161 | 75298.5 |
| beta-ketoacyl-acp synthase i | E0F20_17775 | Not Available | Positive | 3604261 - 3605475 | 42234.3 |
| duf3828 domain-containing protein | E0F20_17780 | Not Available | Negative | 3605526 - 3606044 | 19910.8 |
| hypothetical protein | E0F20_17785 | Not Available | Negative | 3606044 - 3606412 | 13353.6 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

