Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-SCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
118039 bp
Thymine Count
117524 bp
Guanine Count
108052 bp
Cytosine Count
108269 bp
Genome Length
451884 bp
Protein-coding Genes
4973 genes
Non-Coding Genes
282 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein-export chaperone secb | E0F20_17640 | Not Available | Positive | 3576342 - 3576809 | 17246.2 |
| nad(p)h-dependent glycerol-3-phosphate dehydrogenase | E0F20_17645 | Not Available | Positive | 3576809 - 3577828 | 36210.7 |
| serine o-acetyltransferase | E0F20_17650 | Not Available | Positive | 3577907 - 3578728 | 29298.5 |
| trna (uridine(34)/cytosine(34)/5- carboxymethylaminomethyluridine(34)-2'-o)- methyltransferase trml | E0F20_17655 | Not Available | Negative | 3578815 - 3579288 | 17602.2 |
| mfs transporter | E0F20_17660 | Not Available | Negative | 3579335 - 3580675 | 48408.4 |
| alpha-hydroxy-acid oxidizing protein | E0F20_17665 | Not Available | Negative | 3580871 - 3582061 | 42781.6 |
| transcriptional regulator lldr | E0F20_17670 | Not Available | Negative | 3582058 - 3582834 | 28826.4 |
| l-lactate permease | E0F20_17675 | Not Available | Negative | 3582831 - 3584486 | 59445.8 |
| yibl family ribosome-associated protein | E0F20_17680 | Not Available | Negative | 3584750 - 3585112 | 13876.9 |
| methyl-accepting chemotaxis protein | E0F20_17685 | Not Available | Positive | 3585377 - 3587275 | 68720.2 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

