Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-SCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
118039 bp
Thymine Count
117524 bp
Guanine Count
108052 bp
Cytosine Count
108269 bp
Genome Length
451884 bp
Protein-coding Genes
4973 genes
Non-Coding Genes
282 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cupin | E0F20_00560 | Not Available | Positive | 120361 - 120705 | 12488.8 |
| arac family transcriptional regulator | E0F20_00565 | Not Available | Negative | 120782 - 121645 | 32687.5 |
| response regulator transcription factor | E0F20_00570 | Not Available | Negative | 121661 - 122395 | 28750.7 |
| sensor histidine kinase | E0F20_00575 | Not Available | Negative | 122410 - 124107 | 62598.0 |
| alanine transaminase | E0F20_00580 | Not Available | Positive | 124495 - 125733 | 46109.5 |
| membrane protein ypdk | E0F20_00585 | Not Available | Negative | 125799 - 125870 | 2704.57 |
| duf1311 domain-containing protein | E0F20_00590 | Not Available | Positive | 126214 - 126831 | 22484.7 |
| kdo(2)-lipid iv(a) palmitoleoyltransferase | E0F20_00595 | Not Available | Negative | 126873 - 127793 | 35388.5 |
| duf2545 family protein | E0F20_00600 | Not Available | Positive | 128234 - 128476 | 8920.45 |
| phosphoglycerate transporter pgtp | E0F20_00605 | Not Available | Negative | 128585 - 129976 | 50992.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

