Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-SCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
118039 bp
Thymine Count
117524 bp
Guanine Count
108052 bp
Cytosine Count
108269 bp
Genome Length
451884 bp
Protein-coding Genes
4973 genes
Non-Coding Genes
282 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gentisate 1,2-dioxygenase | E0F20_17540 | Not Available | Positive | 3557384 - 3558421 | 39190.3 |
| faa hydrolase family protein | E0F20_17545 | Not Available | Positive | 3558437 - 3559138 | 25969.9 |
| maleylacetoacetate isomerase | E0F20_17550 | Not Available | Positive | 3559147 - 3559791 | 23805.6 |
| 3-hydroxybenzoate 6-monooxygenase | E0F20_17555 | Not Available | Positive | 3559806 - 3560999 | 44074.6 |
| trna dihydrouridine(16) synthase dusc | E0F20_17560 | Not Available | Positive | 3561061 - 3561999 | 34768.0 |
| protein yohp | E0F20_17565 | Not Available | Negative | 3562068 - 3562151 | 3134.37 |
| class i sam-dependent methyltransferase | E0F20_17570 | Not Available | Negative | 3562223 - 3562957 | 27404.5 |
| glycosyltransferase family 2 protein | E0F20_17575 | Not Available | Negative | 3563000 - 3563601 | 23109.4 |
| o-antigen ligase family protein | E0F20_17580 | Not Available | Negative | 3563594 - 3564772 | 43019.4 |
| lipopolysaccharide heptosyltransferase rfac | E0F20_17585 | Not Available | Negative | 3564894 - 3565862 | 36043.1 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

