Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-SCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
118039 bp
Thymine Count
117524 bp
Guanine Count
108052 bp
Cytosine Count
108269 bp
Genome Length
451884 bp
Protein-coding Genes
4973 genes
Non-Coding Genes
282 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| galactose/methyl galactoside abc transporter permease mglc | E0F20_17490 | Not Available | Positive | 3547856 - 3548866 | 35620.4 |
| nad-dependent dihydropyrimidine dehydrogenase subunit prea | E0F20_17495 | Not Available | Negative | 3548924 - 3550159 | 45064.4 |
| nad(p)-dependent oxidoreductase | E0F20_17500 | Not Available | Negative | 3550153 - 3551394 | 44615.7 |
| duf2542 family protein | E0F20_17505 | Not Available | Negative | 3551628 - 3551867 | 9267.48 |
| outer membrane permeability protein sana | E0F20_17510 | Not Available | Negative | 3551870 - 3552589 | 27339.4 |
| cytidine deaminase | E0F20_17515 | Not Available | Negative | 3552724 - 3553608 | 31744.8 |
| cidb/lrgb family autolysis modulator | E0F20_17520 | Not Available | Negative | 3553757 - 3554452 | 24383.0 |
| hypothetical protein | E0F20_17525 | Not Available | Negative | 3554449 - 3554847 | 14615.7 |
| lysr family transcriptional regulator | E0F20_17530 | Not Available | Negative | 3554979 - 3555887 | 33612.1 |
| mfs transporter | E0F20_17535 | Not Available | Positive | 3556014 - 3557372 | 48338.4 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

