Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-SCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
118039 bp
Thymine Count
117524 bp
Guanine Count
108052 bp
Cytosine Count
108269 bp
Genome Length
451884 bp
Protein-coding Genes
4973 genes
Non-Coding Genes
282 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| diguanylate cyclase | E0F20_17440 | Not Available | Negative | 3535945 - 3537333 | 52864.2 |
| hypothetical protein | E0F20_17445 | Not Available | Negative | 3537413 - 3538045 | 23186.8 |
| duf1471 domain-containing protein | E0F20_17450 | Not Available | Positive | 3538315 - 3538590 | 9897.9 |
| propionate catabolism operon regulatory protein prpr | E0F20_17455 | Not Available | Negative | 3538623 - 3540233 | 59558.0 |
| s-formylglutathione hydrolase | E0F20_17460 | Not Available | Negative | 3540788 - 3541624 | 31269.9 |
| gtp cyclohydrolase i fole | E0F20_17465 | Not Available | Positive | 3541947 - 3542615 | 24879.1 |
| duf418 family protein | E0F20_17470 | Not Available | Positive | 3542630 - 3543787 | 43526.4 |
| hth-type transcriptional regulator gals | E0F20_17475 | Not Available | Positive | 3543932 - 3544957 | 36973.8 |
| galactose/glucose abc transporter substrate-binding protein mglb | E0F20_17480 | Not Available | Positive | 3545250 - 3546248 | 35818.7 |
| galactose/methyl galactoside abc transporter atp-binding protein mgla | E0F20_17485 | Not Available | Positive | 3546320 - 3547840 | 56587.9 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

