Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-SCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
118039 bp
Thymine Count
117524 bp
Guanine Count
108052 bp
Cytosine Count
108269 bp
Genome Length
451884 bp
Protein-coding Genes
4973 genes
Non-Coding Genes
282 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ni/fe-hydrogenase b-type cytochrome subunit | E0F20_17290 | Not Available | Positive | 3504052 - 3504786 | 28311.5 |
| hydrogenase 1 maturation protease | E0F20_17295 | Not Available | Positive | 3504783 - 3505364 | 21322.5 |
| hydrogenase-1 operon protein hyae | E0F20_17300 | Not Available | Positive | 3505370 - 3505774 | 15321.4 |
| hydrogenase expression/formation protein | E0F20_17305 | Not Available | Positive | 3505771 - 3506628 | 31407.4 |
| cytochrome bd-ii oxidase subunit 1 | E0F20_17310 | Not Available | Positive | 3506717 - 3508261 | 58255.4 |
| cytochrome d ubiquinol oxidase subunit ii | E0F20_17315 | Not Available | Positive | 3508273 - 3509409 | 42233.9 |
| cytochrome bd-ii oxidase subunit cbdx | E0F20_17320 | Not Available | Positive | 3509423 - 3509512 | 3533.51 |
| n-acetyltransferase | E0F20_17325 | Not Available | Negative | 3509565 - 3510278 | 27541.7 |
| plp-dependent aminotransferase family protein | E0F20_17330 | Not Available | Negative | 3510471 - 3511940 | 55117.2 |
| gnat family n-acetyltransferase | E0F20_17335 | Not Available | Positive | 3512064 - 3512513 | 17862.2 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

