Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-SCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
118039 bp
Thymine Count
117524 bp
Guanine Count
108052 bp
Cytosine Count
108269 bp
Genome Length
451884 bp
Protein-coding Genes
4973 genes
Non-Coding Genes
282 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| clamp-binding protein crfc | E0F20_17130 | Not Available | Negative | 3466745 - 3469102 | 88781.3 |
| duf1120 domain-containing protein | E0F20_17135 | Not Available | Positive | 3469315 - 3470019 | 24750.3 |
| fimbrial chaperone protein | E0F20_17140 | Not Available | Positive | 3470119 - 3470823 | 26231.1 |
| fimbrial assembly protein | E0F20_17145 | Not Available | Positive | 3470945 - 3473359 | 88339.5 |
| hypothetical protein | E0F20_17150 | Not Available | Positive | 3473356 - 3473907 | 20788.7 |
| duf1120 domain-containing protein | E0F20_17155 | Not Available | Positive | 3474053 - 3474694 | 22834.1 |
| helix-turn-helix domain-containing protein | E0F20_17160 | Not Available | Positive | 3474767 - 3475747 | 36551.0 |
| type i glyceraldehyde-3-phosphate dehydrogenase | E0F20_17165 | Not Available | Positive | 3475826 - 3476836 | 36070.0 |
| hypothetical protein | E0F20_17175 | Not Available | Negative | 3477481 - 3477663 | 6865.38 |
| Trna-val | Not Available | Not Available | Positive | 3477726 - 3477802 | Not Available |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

