Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-SCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
118039 bp
Thymine Count
117524 bp
Guanine Count
108052 bp
Cytosine Count
108269 bp
Genome Length
451884 bp
Protein-coding Genes
4973 genes
Non-Coding Genes
282 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sensor histidine kinase dpib | E0F20_17030 | Not Available | Positive | 3440868 - 3442529 | 61506.6 |
| two-component response regulator dpia | E0F20_17035 | Not Available | Positive | 3442498 - 3443178 | 25326.6 |
| anaerobic c4-dicarboxylate transporter dcuc | E0F20_17040 | Not Available | Negative | 3443294 - 3444679 | 48276.2 |
| anaerobic c4-dicarboxylate transporter | E0F20_17045 | Not Available | Positive | 3445588 - 3446928 | 47982.3 |
| fumarate hydratase | E0F20_17050 | Not Available | Positive | 3447025 - 3448671 | 59879.4 |
| duf2238 domain-containing protein | E0F20_17055 | Not Available | Positive | 3448819 - 3449442 | 22997.8 |
| hypothetical protein | E0F20_17060 | Not Available | Negative | 3449463 - 3449717 | 9471.96 |
| melibiose:sodium transporter melb | E0F20_17065 | Not Available | Negative | 3449720 - 3451150 | 52727.4 |
| alpha-galactosidase | E0F20_17070 | Not Available | Negative | 3451243 - 3452598 | 50634.9 |
| transcriptional regulator melr | E0F20_17075 | Not Available | Positive | 3452868 - 3453800 | 35633.7 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

