Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-SCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
118039 bp
Thymine Count
117524 bp
Guanine Count
108052 bp
Cytosine Count
108269 bp
Genome Length
451884 bp
Protein-coding Genes
4973 genes
Non-Coding Genes
282 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bifunctional chorismate mutase/prephenate dehydrogenase | E0F20_16720 | Not Available | Positive | 3362811 - 3363932 | 41927.7 |
| bifunctional chorismate mutase/prephenate dehydratase | E0F20_16725 | Not Available | Negative | 3364029 - 3365189 | 42949.6 |
| hypothetical protein | E0F20_16730 | Not Available | Negative | 3365289 - 3365336 | 1886.4 |
| ribosome-associated translation inhibitor raia | E0F20_16735 | Not Available | Negative | 3365440 - 3365778 | 12696.2 |
| outer membrane protein assembly factor bamd | E0F20_16740 | Not Available | Negative | 3366048 - 3366785 | 27785.9 |
| 23s rrna pseudouridine(1911/1915/1917) synthase rlud | E0F20_16745 | Not Available | Positive | 3366917 - 3367897 | 37135.9 |
| polyphenol oxidase | E0F20_16750 | Not Available | Positive | 3367894 - 3368625 | 26290.2 |
| atp-dependent chaperone clpb | E0F20_16755 | Not Available | Positive | 3368755 - 3371328 | 95517.7 |
| type i secretion system outer membrane protein | E0F20_16760 | Not Available | Positive | 3372188 - 3373468 | 46425.5 |
| ig-like domain-containing protein | E0F20_16765 | Not Available | Positive | 3373597 - 3391644 | 606570.0 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

