Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-SCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
118039 bp
Thymine Count
117524 bp
Guanine Count
108052 bp
Cytosine Count
108269 bp
Genome Length
451884 bp
Protein-coding Genes
4973 genes
Non-Coding Genes
282 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ssra-binding protein smpb | E0F20_16615 | Not Available | Negative | 3347428 - 3347910 | 18184.0 |
| type ii toxin-antitoxin system rata family toxin | E0F20_16620 | Not Available | Positive | 3348053 - 3348508 | 16856.5 |
| rnfh family protein | E0F20_16625 | Not Available | Positive | 3348492 - 3348788 | 11017.4 |
| outer membrane protein assembly factor bame | E0F20_16630 | Not Available | Negative | 3348839 - 3349183 | 12506.0 |
| dna repair protein recn | E0F20_16635 | Not Available | Negative | 3349333 - 3350994 | 61408.2 |
| nad(+) kinase | E0F20_16640 | Not Available | Negative | 3351080 - 3351958 | 32552.3 |
| molecular chaperone grpe | E0F20_16645 | Not Available | Positive | 3351890 - 3352084 | 7192.82 |
| nucleotide exchange factor grpe | E0F20_16650 | Not Available | Positive | 3352081 - 3352674 | 21745.9 |
| duf21 domain-containing protein | E0F20_16655 | Not Available | Negative | 3352724 - 3354013 | 48104.1 |
| inner membrane protein ypjd | E0F20_16660 | Not Available | Negative | 3354032 - 3354823 | 29202.8 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

