Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-SCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
118039 bp
Thymine Count
117524 bp
Guanine Count
108052 bp
Cytosine Count
108269 bp
Genome Length
451884 bp
Protein-coding Genes
4973 genes
Non-Coding Genes
282 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ggdef domain-containing protein | E0F20_16560 | Not Available | Negative | 3337949 - 3339421 | 55228.1 |
| hypothetical protein | E0F20_16565 | Not Available | Negative | 3339607 - 3339882 | 10139.2 |
| hypothetical protein | E0F20_16570 | Not Available | Positive | 3340122 - 3340580 | 17709.9 |
| yebc/pmpr family dna-binding transcriptional regulator | E0F20_16575 | Not Available | Negative | 3340653 - 3341369 | 25719.2 |
| outer membrane protein ompw | E0F20_16580 | Not Available | Negative | 3341938 - 3342576 | 22983.2 |
| upf0259 family protein | E0F20_16585 | Not Available | Positive | 3342975 - 3343718 | 26523.8 |
| septation protein a | E0F20_16590 | Not Available | Positive | 3343773 - 3344312 | 20769.1 |
| acyl-coa thioester hydrolase ycia | E0F20_16595 | Not Available | Positive | 3344478 - 3344879 | 14366.6 |
| tonb system transport protein tonb | E0F20_16600 | Not Available | Negative | 3344944 - 3345663 | 26051.6 |
| ycii family protein | E0F20_16605 | Not Available | Positive | 3345888 - 3346184 | 10550.5 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

