Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-SCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
118039 bp
Thymine Count
117524 bp
Guanine Count
108052 bp
Cytosine Count
108269 bp
Genome Length
451884 bp
Protein-coding Genes
4973 genes
Non-Coding Genes
282 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| eal domain-containing protein | E0F20_16460 | Not Available | Positive | 3315664 - 3317265 | 59882.9 |
| terc family protein | E0F20_16465 | Not Available | Negative | 3317272 - 3318831 | 56539.7 |
| pts mannose transporter subunit iiab | E0F20_16470 | Not Available | Positive | 3319291 - 3320253 | 34822.2 |
| pts mannose/fructose/sorbose transporter subunit iic | E0F20_16475 | Not Available | Positive | 3320312 - 3321112 | 27510.4 |
| pts mannose transporter subunit iid | E0F20_16480 | Not Available | Positive | 3321125 - 3321976 | 30872.4 |
| duf986 domain-containing protein | E0F20_16485 | Not Available | Positive | 3322037 - 3322465 | 16753.1 |
| type i dna topoisomerase | E0F20_16490 | Not Available | Negative | 3322583 - 3325180 | 97403.0 |
| duf2498 family protein | E0F20_16495 | Not Available | Positive | 3325579 - 3325830 | 9376.23 |
| protease sohb | E0F20_16500 | Not Available | Negative | 3325941 - 3326987 | 39093.6 |
| ycik family oxidoreductase | E0F20_16505 | Not Available | Positive | 3327209 - 3327970 | 28001.6 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

