Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-SCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
118039 bp
Thymine Count
117524 bp
Guanine Count
108052 bp
Cytosine Count
108269 bp
Genome Length
451884 bp
Protein-coding Genes
4973 genes
Non-Coding Genes
282 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribonuclease d | E0F20_16410 | Not Available | Negative | 3304854 - 3305969 | 42311.0 |
| long-chain-fatty-acid--coa ligase fadd | E0F20_16415 | Not Available | Negative | 3306054 - 3307739 | 62271.6 |
| slp family lipoprotein | E0F20_16420 | Not Available | Negative | 3307944 - 3308528 | 21046.6 |
| trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex dimerization subunit type 1 tsab | E0F20_16425 | Not Available | Negative | 3308623 - 3309318 | 24809.8 |
| atp-dependent dna helicase | E0F20_16430 | Not Available | Negative | 3309377 - 3311287 | 70365.9 |
| rida family protein | E0F20_16435 | Not Available | Positive | 3311428 - 3311772 | 12577.0 |
| yoah family protein | E0F20_16440 | Not Available | Negative | 3311779 - 3311958 | 6543.67 |
| aminodeoxychorismate synthase component 1 | E0F20_16445 | Not Available | Positive | 3312039 - 3313403 | 50831.3 |
| coa pyrophosphatase | E0F20_16450 | Not Available | Positive | 3313407 - 3313985 | 21223.7 |
| l-serine ammonia-lyase | E0F20_16455 | Not Available | Positive | 3314169 - 3315533 | 48774.5 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

