Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-SCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
118039 bp
Thymine Count
117524 bp
Guanine Count
108052 bp
Cytosine Count
108269 bp
Genome Length
451884 bp
Protein-coding Genes
4973 genes
Non-Coding Genes
282 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf853 domain-containing protein | E0F20_16135 | Not Available | Negative | 3257805 - 3259307 | 54181.3 |
| nad(p)-dependent alcohol dehydrogenase | E0F20_16140 | Not Available | Negative | 3259456 - 3260475 | 36372.8 |
| Trna-leu | Not Available | Not Available | Positive | 3260696 - 3260780 | Not Available |
| peptidylprolyl isomerase a | E0F20_16215 | Not Available | Positive | 3272602 - 3273174 | 20317.3 |
| duf2559 family protein | E0F20_16220 | Not Available | Positive | 3273281 - 3273448 | 6683.02 |
| putative adenosine monophosphate-protein transferase fic | E0F20_16225 | Not Available | Positive | 3273438 - 3274040 | 22865.3 |
| aminodeoxychorismate synthase component 2 | E0F20_16230 | Not Available | Positive | 3274072 - 3274635 | 20752.9 |
| aspartate aminotransferase family protein | E0F20_16235 | Not Available | Positive | 3274721 - 3275938 | 43615.3 |
| hypothetical protein | E0F20_16240 | Not Available | Negative | 3276030 - 3278117 | 79292.6 |
| camp-activated global transcriptional regulator crp | E0F20_16245 | Not Available | Negative | 3278169 - 3278801 | 23657.9 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

