Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-SCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
118039 bp
Thymine Count
117524 bp
Guanine Count
108052 bp
Cytosine Count
108269 bp
Genome Length
451884 bp
Protein-coding Genes
4973 genes
Non-Coding Genes
282 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribonuclease e inhibitor rrab | E0F20_16085 | Not Available | Positive | 3247329 - 3247754 | 15962.8 |
| trna isopentenyl-2-thiomethyl-a-37 hydroxylase miae | E0F20_16090 | Not Available | Positive | 3247806 - 3248564 | 28963.0 |
| topoisomerase ii | E0F20_16095 | Not Available | Positive | 3248729 - 3249559 | 30656.8 |
| gnat family n-acetyltransferase | E0F20_16100 | Not Available | Negative | 3249586 - 3250089 | 18116.7 |
| valine--trna ligase | E0F20_16105 | Not Available | Negative | 3250308 - 3253163 | 108098.0 |
| dna polymerase iii subunit chi | E0F20_16110 | Not Available | Negative | 3253163 - 3253645 | 17984.2 |
| leucyl aminopeptidase | E0F20_16115 | Not Available | Negative | 3253743 - 3255254 | 54876.0 |
| hypothetical protein | E0F20_16120 | Not Available | Negative | 3255364 - 3255558 | 7274.92 |
| lipopolysaccharide abc transporter permease lptf | E0F20_16125 | Not Available | Positive | 3255521 - 3256621 | 40397.5 |
| lipopolysaccharide abc transporter permease lptg | E0F20_16130 | Not Available | Positive | 3256621 - 3257703 | 39545.9 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

