Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-SCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
118039 bp
Thymine Count
117524 bp
Guanine Count
108052 bp
Cytosine Count
108269 bp
Genome Length
451884 bp
Protein-coding Genes
4973 genes
Non-Coding Genes
282 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| citrate synthase | E0F20_16035 | Not Available | Negative | 3234723 - 3236006 | 48096.8 |
| succinate dehydrogenase cytochrome b556 subunit | E0F20_16040 | Not Available | Positive | 3236719 - 3237108 | 14253.1 |
| succinate dehydrogenase membrane anchor subunit | E0F20_16045 | Not Available | Positive | 3237102 - 3237449 | 12796.1 |
| succinate dehydrogenase flavoprotein subunit | E0F20_16050 | Not Available | Positive | 3237449 - 3239215 | 64338.5 |
| succinate dehydrogenase iron-sulfur subunit | E0F20_16055 | Not Available | Positive | 3239231 - 3239947 | 26715.4 |
| 2-oxoglutarate dehydrogenase e1 component | E0F20_16060 | Not Available | Positive | 3240348 - 3243149 | 104780.0 |
| 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase | E0F20_16065 | Not Available | Positive | 3243164 - 3244387 | 44254.2 |
| adp-forming succinate--coa ligase subunit beta | E0F20_16070 | Not Available | Positive | 3244478 - 3245644 | 41388.0 |
| succinate--coa ligase subunit alpha | E0F20_16075 | Not Available | Positive | 3245644 - 3246513 | 29807.3 |
| transcriptional regulator | E0F20_16080 | Not Available | Positive | 3246739 - 3247212 | 17980.9 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

