Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-SCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
118039 bp
Thymine Count
117524 bp
Guanine Count
108052 bp
Cytosine Count
108269 bp
Genome Length
451884 bp
Protein-coding Genes
4973 genes
Non-Coding Genes
282 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mfs transporter | E0F20_15985 | Not Available | Negative | 3225440 - 3226921 | 53902.9 |
| nif3-like dinuclear metal center hexameric protein | E0F20_15990 | Not Available | Positive | 3227211 - 3227954 | 27042.1 |
| 5-oxoprolinase subunit pxpb | E0F20_15995 | Not Available | Positive | 3227970 - 3228626 | 24159.1 |
| biotin-dependent carboxyltransferase family protein | E0F20_16000 | Not Available | Positive | 3228620 - 3229552 | 34242.1 |
| 5-oxoprolinase subunit pxpa | E0F20_16005 | Not Available | Positive | 3229542 - 3230276 | 25676.5 |
| duf969 domain-containing protein | E0F20_16010 | Not Available | Positive | 3230330 - 3231052 | 25878.3 |
| duf979 domain-containing protein | E0F20_16015 | Not Available | Positive | 3231049 - 3232044 | 35707.7 |
| pyroglutamyl-peptidase i | E0F20_16020 | Not Available | Positive | 3232054 - 3232698 | 22142.8 |
| endonuclease viii | E0F20_16025 | Not Available | Positive | 3232713 - 3233504 | 29738.7 |
| abrb family transcriptional regulator | E0F20_16030 | Not Available | Negative | 3233501 - 3234547 | 37010.2 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

