Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-SCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
118039 bp
Thymine Count
117524 bp
Guanine Count
108052 bp
Cytosine Count
108269 bp
Genome Length
451884 bp
Protein-coding Genes
4973 genes
Non-Coding Genes
282 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| isocitrate lyase | E0F20_15835 | Not Available | Positive | 3197341 - 3198645 | 47703.3 |
| bifunctional isocitrate dehydrogenase kinase/phosphatase | E0F20_15840 | Not Available | Positive | 3198748 - 3200538 | 69259.1 |
| type ii toxin-antitoxin system phd/yefm family antitoxin | E0F20_15845 | Not Available | Positive | 3200648 - 3200902 | 9493.45 |
| type ii toxin-antitoxin system rele/pare family toxin | E0F20_15850 | Not Available | Positive | 3200930 - 3201223 | 11140.3 |
| glyoxylate bypass operon transcriptional repressor iclr | E0F20_15855 | Not Available | Negative | 3201245 - 3202069 | 29618.8 |
| methionine synthase | E0F20_15860 | Not Available | Positive | 3202264 - 3205947 | 136028.0 |
| na/pi cotransporter family protein | E0F20_15865 | Not Available | Positive | 3206187 - 3207818 | 59613.7 |
| dipeptidase pepe | E0F20_15870 | Not Available | Negative | 3207884 - 3208573 | 24580.8 |
| addiction module toxin rele | E0F20_15875 | Not Available | Positive | 3208787 - 3209146 | 13462.2 |
| xre family transcriptional regulator | E0F20_15880 | Not Available | Positive | 3209136 - 3209453 | 11523.2 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

