Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-SCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
118039 bp
Thymine Count
117524 bp
Guanine Count
108052 bp
Cytosine Count
108269 bp
Genome Length
451884 bp
Protein-coding Genes
4973 genes
Non-Coding Genes
282 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| outer-membrane efflux lipo domain protein | E0F20_15685 | Not Available | Negative | 3164311 - 3164436 | 4876.11 |
| copper/silver response regulator transcription factor silr | E0F20_15690 | Not Available | Positive | 3164438 - 3165118 | 25214.8 |
| copper/silver sensor histidine kinase sils | E0F20_15695 | Not Available | Positive | 3165111 - 3166586 | 55903.5 |
| copper-binding protein | E0F20_15700 | Not Available | Positive | 3166832 - 3167263 | 15234.0 |
| duf305 domain-containing protein | E0F20_15705 | Not Available | Positive | 3167409 - 3167759 | 12851.7 |
| hnh endonuclease | E0F20_15710 | Not Available | Negative | 3168167 - 3169075 | 34366.1 |
| duf1471 domain-containing protein | E0F20_15715 | Not Available | Positive | 3169706 - 3170650 | 33723.7 |
| amino acid permease | E0F20_15720 | Not Available | Positive | 3170896 - 3172278 | 49452.5 |
| dihydromonapterin reductase | E0F20_15725 | Not Available | Positive | 3172315 - 3173037 | 26139.5 |
| glpm family protein | E0F20_15730 | Not Available | Negative | 3173034 - 3173369 | 12397.9 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

