Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-SCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
118039 bp
Thymine Count
117524 bp
Guanine Count
108052 bp
Cytosine Count
108269 bp
Genome Length
451884 bp
Protein-coding Genes
4973 genes
Non-Coding Genes
282 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptide deformylase | E0F20_15380 | Not Available | Positive | 3121898 - 3122407 | 19286.4 |
| methionyl-trna formyltransferase | E0F20_15385 | Not Available | Positive | 3122422 - 3123369 | 34122.4 |
| 16s rrna (cytosine(967)-c(5))-methyltransferase rsmb | E0F20_15390 | Not Available | Positive | 3123421 - 3124710 | 48358.6 |
| trk system potassium transporter trka | E0F20_15395 | Not Available | Positive | 3124732 - 3126108 | 50338.7 |
| large-conductance mechanosensitive channel protein mscl | E0F20_15400 | Not Available | Positive | 3126250 - 3126663 | 15040.8 |
| alternative ribosome-rescue factor a | E0F20_15405 | Not Available | Negative | 3126660 - 3126878 | 8169.89 |
| zn(2+)-responsive transcriptional regulator | E0F20_15410 | Not Available | Negative | 3126936 - 3127361 | 16190.3 |
| duf1992 domain-containing protein | E0F20_15415 | Not Available | Negative | 3127372 - 3127740 | 13936.6 |
| 50s ribosomal protein l17 | E0F20_15420 | Not Available | Negative | 3127848 - 3128231 | 14395.5 |
| dna-directed rna polymerase subunit alpha | E0F20_15425 | Not Available | Negative | 3128272 - 3129261 | 36499.9 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

