Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-SCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
118039 bp
Thymine Count
117524 bp
Guanine Count
108052 bp
Cytosine Count
108269 bp
Genome Length
451884 bp
Protein-coding Genes
4973 genes
Non-Coding Genes
282 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| envelope stress response membrane protein pspc | E0F20_15280 | Not Available | Positive | 3104648 - 3105007 | 13408.5 |
| phage shock protein pspd | E0F20_15285 | Not Available | Positive | 3105016 - 3105246 | 8329.52 |
| sugar phosphorylase | E0F20_15290 | Not Available | Positive | 3105411 - 3107117 | 64747.8 |
| carbohydrate abc transporter substrate-binding protein | E0F20_15295 | Not Available | Positive | 3107134 - 3108426 | 46672.0 |
| sugar abc transporter permease | E0F20_15300 | Not Available | Positive | 3108447 - 3109328 | 33255.4 |
| carbohydrate abc transporter permease | E0F20_15305 | Not Available | Positive | 3109315 - 3110157 | 31212.1 |
| zinc-binding alcohol dehydrogenase | E0F20_15310 | Not Available | Positive | 3110184 - 3111236 | 38228.6 |
| sugar phosphate isomerase/epimerase | E0F20_15315 | Not Available | Positive | 3111253 - 3112041 | 29980.6 |
| gfo/idh/moca family oxidoreductase | E0F20_15320 | Not Available | Positive | 3112052 - 3113107 | 38759.5 |
| glycoside hydrolase family 65 protein | E0F20_15325 | Not Available | Positive | 3113104 - 3115380 | 85430.1 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

