Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-SCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
118039 bp
Thymine Count
117524 bp
Guanine Count
108052 bp
Cytosine Count
108269 bp
Genome Length
451884 bp
Protein-coding Genes
4973 genes
Non-Coding Genes
282 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ycho/ychp family invasin | E0F20_15080 | Not Available | Negative | 3060878 - 3062263 | 51517.2 |
| hypothetical protein | E0F20_15085 | Not Available | Positive | 3062439 - 3062792 | 12578.4 |
| duf1883 domain-containing protein | E0F20_15090 | Not Available | Positive | 3063055 - 3063300 | 9080.83 |
| gamma-glutamylcyclotransferase | E0F20_15095 | Not Available | Negative | 3063355 - 3064050 | 25296.6 |
| duf1971 domain-containing protein | E0F20_15100 | Not Available | Negative | 3064540 - 3064881 | 12803.9 |
| disulfide bond formation protein dsbb | E0F20_15105 | Not Available | Negative | 3064994 - 3065524 | 20094.3 |
| na(+)/h(+) antiporter nhab | E0F20_15110 | Not Available | Negative | 3065666 - 3067210 | 56638.5 |
| fatty acid metabolism transcriptional regulator fadr | E0F20_15115 | Not Available | Positive | 3067447 - 3068166 | 27054.2 |
| spovr family protein | E0F20_15120 | Not Available | Negative | 3068269 - 3069801 | 60627.9 |
| d-amino acid dehydrogenase | E0F20_15125 | Not Available | Positive | 3070124 - 3071422 | 47453.9 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

