Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-SCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
118039 bp
Thymine Count
117524 bp
Guanine Count
108052 bp
Cytosine Count
108269 bp
Genome Length
451884 bp
Protein-coding Genes
4973 genes
Non-Coding Genes
282 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutaredoxin-like protein nrdh | E0F20_14765 | Not Available | Positive | 3001473 - 3001718 | 9358.22 |
| class ib ribonucleoside-diphosphate reductase assembly flavoprotein nrdi | E0F20_14770 | Not Available | Positive | 3001715 - 3002125 | 15296.3 |
| class 1b ribonucleoside-diphosphate reductase subunit alpha | E0F20_14775 | Not Available | Positive | 3002098 - 3004242 | 80344.5 |
| class 1b ribonucleoside-diphosphate reductase subunit beta | E0F20_14780 | Not Available | Positive | 3004253 - 3005212 | 36230.5 |
| proline/glycine betaine abc transporter atp-binding protein prov | E0F20_14790 | Not Available | Positive | 3005567 - 3006769 | 44103.5 |
| proline/glycine betaine abc transporter permease prow | E0F20_14795 | Not Available | Positive | 3006762 - 3007826 | 37558.0 |
| proline/glycine betaine abc transporter substrate-binding protein prox | E0F20_14800 | Not Available | Positive | 3007895 - 3008890 | 36246.0 |
| mfs transporter | E0F20_14805 | Not Available | Positive | 3009082 - 3010266 | 41699.2 |
| branched-chain amino acid abc transporter permease | E0F20_14810 | Not Available | Positive | 3010389 - 3011126 | 26069.0 |
| l-valine transporter subunit ygah | E0F20_14815 | Not Available | Positive | 3011116 - 3011451 | 12075.5 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

