Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-SCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
118039 bp
Thymine Count
117524 bp
Guanine Count
108052 bp
Cytosine Count
108269 bp
Genome Length
451884 bp
Protein-coding Genes
4973 genes
Non-Coding Genes
282 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptidoglycan-binding protein lysm | E0F20_14715 | Not Available | Negative | 2995262 - 2995711 | 16034.9 |
| yqae/pmp3 family membrane protein | E0F20_14720 | Not Available | Negative | 2995807 - 2995965 | 5864.59 |
| arsr family transcriptional regulator | E0F20_14725 | Not Available | Positive | 2996150 - 2996449 | 10617.0 |
| duf2892 domain-containing protein | E0F20_14730 | Not Available | Positive | 2996459 - 2996986 | 18543.7 |
| hypothetical protein | E0F20_14735 | Not Available | Positive | 2997077 - 2997256 | 6429.61 |
| dna-binding protein stpa | E0F20_14740 | Not Available | Negative | 2997293 - 2997694 | 15202.3 |
| l-alanine exporter alae | E0F20_14745 | Not Available | Positive | 2998252 - 2998701 | 16810.7 |
| duf2002 family protein | E0F20_14750 | Not Available | Negative | 2998738 - 2999088 | 13284.7 |
| plp-dependent aminotransferase family protein | E0F20_14755 | Not Available | Negative | 2999337 - 3000671 | 49951.3 |
| carboxymuconolactone decarboxylase family protein | E0F20_14760 | Not Available | Positive | 3000762 - 3001193 | 16039.3 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

