Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-SCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
118039 bp
Thymine Count
117524 bp
Guanine Count
108052 bp
Cytosine Count
108269 bp
Genome Length
451884 bp
Protein-coding Genes
4973 genes
Non-Coding Genes
282 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 30s ribosomal protein s12 methylthiotransferase rimo | E0F20_14665 | Not Available | Negative | 2983344 - 2984669 | 49571.6 |
| carbon-phosphorus lyase | E0F20_14670 | Not Available | Positive | 2984872 - 2985696 | 30942.6 |
| mfs transporter | E0F20_14675 | Not Available | Positive | 2985708 - 2986943 | 45377.9 |
| mgtc/sapb family protein | E0F20_14680 | Not Available | Positive | 2986975 - 2987688 | 25942.3 |
| carbon starvation induced protein csid | E0F20_14685 | Not Available | Positive | 2987928 - 2988905 | 37207.3 |
| l-2-hydroxyglutarate oxidase | E0F20_14690 | Not Available | Positive | 2988925 - 2990193 | 45996.7 |
| nadp-dependent succinate-semialdehyde dehydrogenase i | E0F20_14695 | Not Available | Positive | 2990217 - 2991665 | 51847.1 |
| 4-aminobutyrate--2-oxoglutarate transaminase | E0F20_14700 | Not Available | Positive | 2991691 - 2992974 | 45807.4 |
| gaba permease | E0F20_14705 | Not Available | Positive | 2993117 - 2994517 | 50949.8 |
| dna-binding transcriptional regulator csir | E0F20_14710 | Not Available | Positive | 2994563 - 2995249 | 26057.6 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

