Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-SCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
118039 bp
Thymine Count
117524 bp
Guanine Count
108052 bp
Cytosine Count
108269 bp
Genome Length
451884 bp
Protein-coding Genes
4973 genes
Non-Coding Genes
282 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | E0F20_14415 | Not Available | Positive | 2935361 - 2935615 | 9319.06 |
| response regulator transcription factor | E0F20_14420 | Not Available | Positive | 2935587 - 2936318 | 26797.0 |
| carbohydrate kinase family protein | E0F20_14425 | Not Available | Negative | 2936367 - 2937371 | 36824.2 |
| ketose 1,6-bisphosphate aldolase | E0F20_14430 | Not Available | Negative | 2937368 - 2938228 | 31293.4 |
| d-lyxose/d-mannose family sugar isomerase | E0F20_14435 | Not Available | Negative | 2938243 - 2938926 | 25770.3 |
| transcriptional regulator | E0F20_14440 | Not Available | Negative | 2939047 - 2939988 | 32787.6 |
| ribose abc transporter permease | E0F20_14445 | Not Available | Negative | 2940077 - 2941072 | 34654.6 |
| sugar abc transporter atp-binding protein | E0F20_14450 | Not Available | Negative | 2941065 - 2942588 | 55653.0 |
| histidine kinase | E0F20_14455 | Not Available | Positive | 2942594 - 2942701 | 3704.54 |
| hybrid sensor histidine kinase/response regulator | E0F20_14460 | Not Available | Positive | 2942703 - 2944967 | 82891.9 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

