Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-SCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
118039 bp
Thymine Count
117524 bp
Guanine Count
108052 bp
Cytosine Count
108269 bp
Genome Length
451884 bp
Protein-coding Genes
4973 genes
Non-Coding Genes
282 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna mismatch repair protein muts | E0F20_14160 | Not Available | Positive | 2881701 - 2884262 | 95139.4 |
| type i toxin-antitoxin system hok family toxin | E0F20_14165 | Not Available | Negative | 2884372 - 2884524 | 5642.22 |
| duf1062 domain-containing protein | E0F20_14175 | Not Available | Negative | 2884765 - 2885001 | 9249.11 |
| ubid family decarboxylase | E0F20_14180 | Not Available | Negative | 2885012 - 2886439 | 52513.0 |
| ubix family flavin prenyltransferase | E0F20_14185 | Not Available | Negative | 2886439 - 2887032 | 21533.3 |
| marr family transcriptional regulator | E0F20_14190 | Not Available | Positive | 2887190 - 2887594 | 15585.8 |
| rna polymerase sigma factor rpos | E0F20_14195 | Not Available | Negative | 2887737 - 2888729 | 37934.9 |
| murein hydrolase activator nlpd | E0F20_14200 | Not Available | Negative | 2888792 - 2889919 | 39449.3 |
| protein-l-isoaspartate(d-aspartate) o-methyltransferase | E0F20_14205 | Not Available | Negative | 2890059 - 2890685 | 23372.5 |
| 5'/3'-nucleotidase sure | E0F20_14210 | Not Available | Negative | 2890679 - 2891440 | 27151.1 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

