Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-SCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
118039 bp
Thymine Count
117524 bp
Guanine Count
108052 bp
Cytosine Count
108269 bp
Genome Length
451884 bp
Protein-coding Genes
4973 genes
Non-Coding Genes
282 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ftr1 family protein | E0F20_14110 | Not Available | Positive | 2870161 - 2870994 | 30497.0 |
| iron uptake system protein efeo | E0F20_14115 | Not Available | Positive | 2871053 - 2872180 | 40957.4 |
| deferrochelatase/peroxidase efeb | E0F20_14120 | Not Available | Positive | 2872186 - 2873469 | 46698.6 |
| phosphate starvation-inducible protein phoh | E0F20_14125 | Not Available | Positive | 2873872 - 2874780 | 33354.0 |
| duf535 domain-containing protein | E0F20_14130 | Not Available | Negative | 2875164 - 2876076 | 35515.4 |
| is1 family transposase | E0F20_14135 | Not Available | Positive | 2876077 - 2876263 | 7331.97 |
| efflux rnd transporter periplasmic adaptor subunit | E0F20_14140 | Not Available | Positive | 2876256 - 2877203 | 34567.1 |
| efflux rnd transporter permease subunit | E0F20_14145 | Not Available | Positive | 2877203 - 2880256 | 111399.0 |
| ai-2e family transporter | E0F20_14150 | Not Available | Positive | 2880321 - 2881322 | 36464.1 |
| integrase | E0F20_14155 | Not Available | Negative | 2881405 - 2881548 | 5075.24 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

