Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-SCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
118039 bp
Thymine Count
117524 bp
Guanine Count
108052 bp
Cytosine Count
108269 bp
Genome Length
451884 bp
Protein-coding Genes
4973 genes
Non-Coding Genes
282 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative colanic acid polymerase wcad | E0F20_13905 | Not Available | Positive | 2826774 - 2827991 | 45293.0 |
| colanic acid biosynthesis glycosyltransferase wcae | E0F20_13910 | Not Available | Positive | 2827997 - 2828743 | 27513.2 |
| colanic acid biosynthesis acetyltransferase wcaf | E0F20_13915 | Not Available | Positive | 2828753 - 2829307 | 20161.5 |
| gdp-mannose 4,6-dehydratase | E0F20_13920 | Not Available | Positive | 2829332 - 2830453 | 41985.1 |
| gdp-l-fucose synthase | E0F20_13925 | Not Available | Positive | 2830456 - 2831421 | 35989.1 |
| gdp-mannose mannosyl hydrolase | E0F20_13930 | Not Available | Positive | 2831424 - 2831903 | 18231.4 |
| colanic acid biosynthesis glycosyltransferase wcai | E0F20_13935 | Not Available | Positive | 2831900 - 2833123 | 44949.9 |
| mannose-1-phosphate guanyltransferase | E0F20_13940 | Not Available | Positive | 2833126 - 2834562 | 53134.1 |
| phosphomannomutase cpsg | E0F20_13945 | Not Available | Positive | 2834699 - 2836069 | 50427.6 |
| undecaprenyl-phosphate glucose phosphotransferase | E0F20_13950 | Not Available | Positive | 2836124 - 2837518 | 52687.9 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

