Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-SCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
118039 bp
Thymine Count
117524 bp
Guanine Count
108052 bp
Cytosine Count
108269 bp
Genome Length
451884 bp
Protein-coding Genes
4973 genes
Non-Coding Genes
282 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ni/fe-hydrogenase cytochrome b subunit | E0F20_13855 | Not Available | Negative | 2816320 - 2817498 | 43611.6 |
| hydrogenase 2 operon protein hyba | E0F20_13860 | Not Available | Negative | 2817488 - 2818474 | 35908.8 |
| hydrogenase 2 small subunit | E0F20_13865 | Not Available | Negative | 2818477 - 2819595 | 39647.4 |
| duf2623 domain-containing protein | E0F20_13870 | Not Available | Negative | 2819785 - 2820072 | 10763.8 |
| polysaccharide export protein | E0F20_13875 | Not Available | Positive | 2820432 - 2821571 | 41614.1 |
| low molecular weight protein-tyrosine-phosphatase wzb | E0F20_13880 | Not Available | Positive | 2821577 - 2822026 | 16656.2 |
| tyrosine-protein kinase wzc | E0F20_13885 | Not Available | Positive | 2822023 - 2824179 | 78918.1 |
| colanic acid biosynthesis glycosyltransferase wcaa | E0F20_13890 | Not Available | Positive | 2824252 - 2825094 | 33151.6 |
| colanic acid biosynthesis acetyltransferase wcab | E0F20_13895 | Not Available | Positive | 2825097 - 2825585 | 17573.6 |
| colanic acid biosynthesis glycosyltransferase wcac | E0F20_13900 | Not Available | Positive | 2825582 - 2826799 | 44809.9 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

