Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-SCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
118039 bp
Thymine Count
117524 bp
Guanine Count
108052 bp
Cytosine Count
108269 bp
Genome Length
451884 bp
Protein-coding Genes
4973 genes
Non-Coding Genes
282 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mfs transporter | E0F20_13595 | Not Available | Negative | 2772546 - 2773985 | 51615.1 |
| duf5107 domain-containing protein | E0F20_13600 | Not Available | Negative | 2774059 - 2777325 | 122974.0 |
| rok family transcriptional regulator | E0F20_13605 | Not Available | Positive | 2777440 - 2778633 | 44240.8 |
| dna-binding transcriptional regulator hcar | E0F20_13610 | Not Available | Negative | 2778637 - 2779530 | 32815.1 |
| aromatic ring-hydroxylating dioxygenase subunit alpha | E0F20_13615 | Not Available | Positive | 2779666 - 2781027 | 51028.7 |
| 3-phenylpropionate/cinnamic acid dioxygenase subunit beta | E0F20_13620 | Not Available | Positive | 2781024 - 2781542 | 20489.3 |
| bifunctional 3-phenylpropionate/cinnamic acid dioxygenase ferredoxin subunit | E0F20_13625 | Not Available | Positive | 2781542 - 2781862 | 11320.3 |
| 3-(cis-5,6-dihydroxycyclohexa-1, 3-dien-1-yl)propanoate dehydrogenase | E0F20_13630 | Not Available | Positive | 2781859 - 2782671 | 28473.2 |
| phenylpropionate dioxygenase ferredoxin reductase subunit | E0F20_13635 | Not Available | Positive | 2782681 - 2783883 | 43372.2 |
| serine hydroxymethyltransferase | E0F20_13640 | Not Available | Negative | 2783976 - 2785229 | 45484.5 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

