Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-SCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
118039 bp
Thymine Count
117524 bp
Guanine Count
108052 bp
Cytosine Count
108269 bp
Genome Length
451884 bp
Protein-coding Genes
4973 genes
Non-Coding Genes
282 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| incfii family plasmid replication initiator repa | E0F20_13545 | Not Available | Positive | 2760782 - 2761639 | 33075.2 |
| autoinducer 2 abc transporter substrate-binding protein | E0F20_13550 | Not Available | Positive | 2762088 - 2763071 | 35508.0 |
| sugar abc transporter atp-binding protein | E0F20_13555 | Not Available | Positive | 2763175 - 2764683 | 55587.5 |
| abc transporter permease | E0F20_13560 | Not Available | Positive | 2764676 - 2765665 | 35108.6 |
| abc transporter permease | E0F20_13565 | Not Available | Positive | 2765667 - 2766620 | 32940.9 |
| ribulokinase | E0F20_13570 | Not Available | Positive | 2766638 - 2768275 | 59815.5 |
| sis domain-containing protein | E0F20_13575 | Not Available | Positive | 2768272 - 2768871 | 20851.2 |
| stationary phase inducible protein csie | E0F20_13580 | Not Available | Positive | 2769195 - 2770472 | 48750.2 |
| 3-phenylpropionate mfs transporter | E0F20_13585 | Not Available | Negative | 2770467 - 2771615 | 41834.1 |
| aldose 1-epimerase | E0F20_13590 | Not Available | Negative | 2771704 - 2772546 | 31462.6 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

