Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-SCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
118039 bp
Thymine Count
117524 bp
Guanine Count
108052 bp
Cytosine Count
108269 bp
Genome Length
451884 bp
Protein-coding Genes
4973 genes
Non-Coding Genes
282 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| succinyl-diaminopimelate desuccinylase | E0F20_00165 | Not Available | Negative | 42793 - 43920 | 41433.7 |
| arsc family reductase | E0F20_00170 | Not Available | Negative | 43924 - 44280 | 13422.2 |
| hypothetical protein | E0F20_00175 | Not Available | Positive | 44669 - 44728 | 2408.02 |
| Ncrna_class:other | Not Available | Not Available | Positive | 45310 - 45443 | Not Available |
| multidrug efflux rnd transporter permease acrd | E0F20_00180 | Not Available | Negative | 44804 - 47917 | 113014.0 |
| nitrate/nitrite two-component system sensor histidine kinase narq | E0F20_00185 | Not Available | Negative | 48102 - 49799 | 63405.5 |
| oxidoreductase fes-binding subunit | E0F20_00190 | Not Available | Positive | 50060 - 52039 | 71878.0 |
| gdp-mannose pyrophosphatase nudk | E0F20_00195 | Not Available | Positive | 52196 - 52771 | 21676.9 |
| duf1176 domain-containing protein | E0F20_00200 | Not Available | Positive | 52895 - 53938 | 38572.3 |
| transketolase | E0F20_00205 | Not Available | Negative | 53928 - 55922 | 72765.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

