Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-SCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
118039 bp
Thymine Count
117524 bp
Guanine Count
108052 bp
Cytosine Count
108269 bp
Genome Length
451884 bp
Protein-coding Genes
4973 genes
Non-Coding Genes
282 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| deda family protein | E0F20_13340 | Not Available | Negative | 2712140 - 2712802 | 24528.9 |
| transcriptional regulator exur | E0F20_13345 | Not Available | Negative | 2713151 - 2713927 | 29949.5 |
| mfs transporter | E0F20_13350 | Not Available | Negative | 2714062 - 2715363 | 46814.8 |
| glucuronate isomerase | E0F20_13355 | Not Available | Positive | 2715835 - 2717247 | 53844.9 |
| altronate dehydratase | E0F20_13360 | Not Available | Positive | 2717263 - 2718750 | 54198.3 |
| ygjv family protein | E0F20_13365 | Not Available | Positive | 2718958 - 2719512 | 20817.2 |
| serine/threonine transporter sstt | E0F20_13370 | Not Available | Negative | 2719529 - 2720773 | 43306.1 |
| terc family protein | E0F20_13375 | Not Available | Negative | 2721017 - 2721985 | 36087.4 |
| gfo/idh/moca family oxidoreductase | E0F20_13380 | Not Available | Negative | 2722257 - 2723255 | 36511.3 |
| m48 family peptidase | E0F20_13385 | Not Available | Negative | 2723328 - 2723828 | 19299.5 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

