Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-SCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
118039 bp
Thymine Count
117524 bp
Guanine Count
108052 bp
Cytosine Count
108269 bp
Genome Length
451884 bp
Protein-coding Genes
4973 genes
Non-Coding Genes
282 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| chromosome partition protein mukb | E0F20_13240 | Not Available | Positive | 2691932 - 2696392 | 170129.0 |
| l,d-transpeptidase | E0F20_13245 | Not Available | Positive | 2696652 - 2698403 | 64800.5 |
| duf882 domain-containing protein | E0F20_13250 | Not Available | Positive | 2698581 - 2699129 | 20226.4 |
| mbl fold metallo-hydrolase | E0F20_13255 | Not Available | Positive | 2699158 - 2699805 | 23616.2 |
| aspartate/tyrosine/aromatic aminotransferase | E0F20_13260 | Not Available | Negative | 2699859 - 2701049 | 43489.6 |
| porin ompf | E0F20_13265 | Not Available | Negative | 2701233 - 2702321 | 39246.9 |
| haaap family serine/threonine permease | E0F20_13270 | Not Available | Positive | 2702710 - 2704041 | 48432.9 |
| serine dehydratase subunit alpha family protein | E0F20_13275 | Not Available | Positive | 2704066 - 2705376 | 45317.7 |
| pirin family protein | E0F20_13280 | Not Available | Negative | 2705607 - 2706308 | 25831.8 |
| lysr family transcriptional regulator | E0F20_13285 | Not Available | Positive | 2706413 - 2707309 | 33116.1 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

