Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-SCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
118039 bp
Thymine Count
117524 bp
Guanine Count
108052 bp
Cytosine Count
108269 bp
Genome Length
451884 bp
Protein-coding Genes
4973 genes
Non-Coding Genes
282 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lipid a abc transporter atp-binding protein/permease msba | E0F20_13190 | Not Available | Positive | 2682209 - 2683957 | 64434.6 |
| tetraacyldisaccharide 4'-kinase | E0F20_13195 | Not Available | Positive | 2683954 - 2684931 | 35179.8 |
| winged helix-turn-helix domain-containing protein | E0F20_13200 | Not Available | Positive | 2684973 - 2686205 | 47734.4 |
| protein ycar | E0F20_13205 | Not Available | Positive | 2686257 - 2686439 | 6839.35 |
| 3-deoxy-manno-octulosonate cytidylyltransferase | E0F20_13210 | Not Available | Positive | 2686436 - 2687182 | 27562.1 |
| hypothetical protein | E0F20_13215 | Not Available | Positive | 2687347 - 2688240 | 34487.7 |
| envelope biogenesis factor elyc | E0F20_13220 | Not Available | Negative | 2688217 - 2688993 | 28337.7 |
| trna uridine 5-oxyacetic acid(34) methyltransferase cmom | E0F20_13225 | Not Available | Positive | 2689129 - 2689932 | 30532.6 |
| chromosome partition protein mukf | E0F20_13230 | Not Available | Positive | 2689925 - 2691247 | 50551.7 |
| chromosome partition protein muke | E0F20_13235 | Not Available | Positive | 2691228 - 2691932 | 27025.1 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

