Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-SCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
118039 bp
Thymine Count
117524 bp
Guanine Count
108052 bp
Cytosine Count
108269 bp
Genome Length
451884 bp
Protein-coding Genes
4973 genes
Non-Coding Genes
282 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | E0F20_13140 | Not Available | Positive | 2668925 - 2669722 | 30851.4 |
| hypothetical protein | E0F20_13145 | Not Available | Negative | 2670360 - 2671028 | 25081.4 |
| 30s ribosomal protein s12 methylthiotransferase accessory factor ycao | E0F20_13150 | Not Available | Negative | 2671374 - 2673134 | 65525.9 |
| duf421 domain-containing protein | E0F20_13155 | Not Available | Positive | 2673271 - 2673963 | 26016.2 |
| 3-phosphoserine/phosphohydroxythreonine transaminase | E0F20_13160 | Not Available | Positive | 2674176 - 2675264 | 39707.4 |
| 3-phosphoshikimate 1-carboxyvinyltransferase | E0F20_13165 | Not Available | Positive | 2675332 - 2676615 | 45991.3 |
| (d)cmp kinase | E0F20_13170 | Not Available | Positive | 2676787 - 2677470 | 24883.9 |
| 30s ribosomal protein s1 | E0F20_13175 | Not Available | Positive | 2677584 - 2679257 | 61159.5 |
| integration host factor subunit beta | E0F20_13180 | Not Available | Positive | 2679417 - 2679701 | 10617.8 |
| comec family protein | E0F20_13185 | Not Available | Positive | 2679908 - 2682172 | 84571.9 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

