Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-SCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
118039 bp
Thymine Count
117524 bp
Guanine Count
108052 bp
Cytosine Count
108269 bp
Genome Length
451884 bp
Protein-coding Genes
4973 genes
Non-Coding Genes
282 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bcr/cfla family multidrug efflux mfs transporter | E0F20_12900 | Not Available | Negative | 2631664 - 2632854 | 43405.6 |
| 16s rrna pseudouridine(516) synthase rsua | E0F20_12905 | Not Available | Negative | 2632870 - 2633577 | 26589.5 |
| dead/deah box helicase | E0F20_12910 | Not Available | Positive | 2633728 - 2635488 | 66413.8 |
| 50s ribosomal protein l25 | E0F20_12915 | Not Available | Positive | 2635613 - 2635897 | 10464.8 |
| nucleoid-associated protein yejk | E0F20_12920 | Not Available | Negative | 2636018 - 2637025 | 37810.6 |
| duf1414 domain-containing protein | E0F20_12925 | Not Available | Positive | 2637160 - 2637387 | 8330.93 |
| duf3413 domain-containing protein | E0F20_12930 | Not Available | Positive | 2637419 - 2639179 | 67022.5 |
| Trna-pro | Not Available | Not Available | Positive | 2639254 - 2639330 | Not Available |
| hypothetical protein | E0F20_12940 | Not Available | Positive | 2639625 - 2639915 | 10783.4 |
| hypothetical protein | E0F20_12945 | Not Available | Negative | 2639924 - 2640256 | 11870.2 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

