Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-SCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
118039 bp
Thymine Count
117524 bp
Guanine Count
108052 bp
Cytosine Count
108269 bp
Genome Length
451884 bp
Protein-coding Genes
4973 genes
Non-Coding Genes
282 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fructuronate reductase | E0F20_12845 | Not Available | Positive | 2619320 - 2620786 | 54285.2 |
| gtp-binding protein | E0F20_12850 | Not Available | Positive | 2620906 - 2621892 | 35916.0 |
| phosphatase pap2 family protein | E0F20_12855 | Not Available | Positive | 2621928 - 2622641 | 26592.6 |
| bifunctional murein dd-endopeptidase/murein ld-carboxypeptidase | E0F20_12860 | Not Available | Positive | 2623055 - 2623624 | 21186.1 |
| cyclic di-gmp phosphodiesterase | E0F20_12865 | Not Available | Positive | 2623797 - 2625356 | 58542.1 |
| abc transporter substrate-binding protein | E0F20_12870 | Not Available | Positive | 2625457 - 2627271 | 69595.7 |
| microcin c abc transporter permease yejb | E0F20_12875 | Not Available | Positive | 2627272 - 2628366 | 40405.6 |
| abc transporter permease | E0F20_12880 | Not Available | Positive | 2628366 - 2629391 | 38087.6 |
| microcin c abc transporter atp-binding protein yejf | E0F20_12885 | Not Available | Positive | 2629393 - 2630982 | 58494.5 |
| hypothetical protein | E0F20_12890 | Not Available | Negative | 2630986 - 2631330 | 12554.9 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

