Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-SCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
118039 bp
Thymine Count
117524 bp
Guanine Count
108052 bp
Cytosine Count
108269 bp
Genome Length
451884 bp
Protein-coding Genes
4973 genes
Non-Coding Genes
282 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nad(+) diphosphatase | E0F20_12735 | Not Available | Positive | 2596511 - 2597284 | 29574.5 |
| uroporphyrinogen decarboxylase | E0F20_12740 | Not Available | Positive | 2597335 - 2598399 | 39292.6 |
| deoxyribonuclease v | E0F20_12745 | Not Available | Positive | 2598409 - 2599089 | 24845.3 |
| duf416 family protein | E0F20_12750 | Not Available | Positive | 2599123 - 2599713 | 22675.0 |
| dna-binding protein hu-alpha | E0F20_12755 | Not Available | Positive | 2599900 - 2600172 | 9521.48 |
| duf1481 domain-containing protein | E0F20_12760 | Not Available | Positive | 2600184 - 2600876 | 26226.7 |
| zinc resistance sensor/chaperone zrap | E0F20_12765 | Not Available | Negative | 2600938 - 2601381 | 15713.7 |
| two-component system sensor histidine kinase zras | E0F20_12770 | Not Available | Positive | 2601646 - 2603031 | 50809.4 |
| sigma-54-dependent response regulator transcription factor zrar | E0F20_12775 | Not Available | Positive | 2603037 - 2604362 | 48595.0 |
| phosphoribosylamine--glycine ligase | E0F20_12780 | Not Available | Negative | 2604359 - 2605648 | 45831.6 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

