Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-SCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
118039 bp
Thymine Count
117524 bp
Guanine Count
108052 bp
Cytosine Count
108269 bp
Genome Length
451884 bp
Protein-coding Genes
4973 genes
Non-Coding Genes
282 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| beta-aspartyl-peptidase | E0F20_00115 | Not Available | Positive | 33404 - 34567 | 41136.8 |
| thioredoxin-dependent thiol peroxidase | E0F20_00120 | Not Available | Negative | 34721 - 35191 | 17625.9 |
| glycine cleavage system transcriptional repressor | E0F20_00125 | Not Available | Negative | 35191 - 35829 | 23238.9 |
| 4-hydroxy-tetrahydrodipicolinate synthase | E0F20_00130 | Not Available | Positive | 35909 - 36787 | 31289.0 |
| outer membrane protein assembly factor bamc | E0F20_00135 | Not Available | Positive | 36804 - 37838 | 36872.6 |
| phosphoribosylaminoimidazolesuccinocarboxamide synthase | E0F20_00140 | Not Available | Positive | 37950 - 38663 | 27012.6 |
| neutral zinc metallopeptidase | E0F20_00145 | Not Available | Positive | 38792 - 39658 | 31358.8 |
| trna(met) cytidine acetyltransferase | E0F20_00150 | Not Available | Positive | 39674 - 41689 | 74232.8 |
| esterase | E0F20_00155 | Not Available | Positive | 41763 - 42461 | 25109.9 |
| hypothetical protein | E0F20_00160 | Not Available | Negative | 42565 - 42765 | 8033.68 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

