Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-SCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
118039 bp
Thymine Count
117524 bp
Guanine Count
108052 bp
Cytosine Count
108269 bp
Genome Length
451884 bp
Protein-coding Genes
4973 genes
Non-Coding Genes
282 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fe-s protein assembly chaperone hsca | E0F20_12585 | Not Available | Negative | 2566703 - 2568553 | 65494.1 |
| co-chaperone hscb | E0F20_12590 | Not Available | Negative | 2568569 - 2569084 | 20161.7 |
| hypothetical protein | E0F20_12595 | Not Available | Negative | 2569024 - 2569221 | 7381.96 |
| iron-sulfur cluster assembly protein isca | E0F20_12600 | Not Available | Negative | 2569193 - 2569516 | 11488.5 |
| fe-s cluster assembly scaffold iscu | E0F20_12605 | Not Available | Negative | 2569537 - 2569923 | 13807.3 |
| iscs subfamily cysteine desulfurase | E0F20_12610 | Not Available | Negative | 2569949 - 2571163 | 45041.1 |
| fe-s cluster assembly transcriptional regulator iscr | E0F20_12615 | Not Available | Negative | 2571276 - 2571767 | 17421.7 |
| trna (cytosine(32)/uridine(32)-2'-o)-methyltransferase trmj | E0F20_12620 | Not Available | Negative | 2571941 - 2572672 | 26709.1 |
| inositol-1-monophosphatase | E0F20_12625 | Not Available | Positive | 2572791 - 2573594 | 29148.8 |
| nickel/cobalt transporter | E0F20_12630 | Not Available | Negative | 2573667 - 2574647 | 35421.7 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

