Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-SCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
118039 bp
Thymine Count
117524 bp
Guanine Count
108052 bp
Cytosine Count
108269 bp
Genome Length
451884 bp
Protein-coding Genes
4973 genes
Non-Coding Genes
282 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytoskeleton protein rodz | E0F20_12535 | Not Available | Negative | 2552266 - 2553258 | 35417.7 |
| bifunctional trna (adenosine(37)-c2)-methyltransferase trmg/ribosomal rna large subunit methyltransferase rlmn | E0F20_12540 | Not Available | Negative | 2553543 - 2554709 | 43470.6 |
| nucleoside-diphosphate kinase | E0F20_12545 | Not Available | Negative | 2555000 - 2555431 | 15501.3 |
| penicillin-binding protein 1c | E0F20_12550 | Not Available | Negative | 2555580 - 2557892 | 84641.8 |
| alpha-2-macroglobulin family protein | E0F20_12555 | Not Available | Negative | 2557893 - 2562827 | 180454.0 |
| 3-mercaptopyruvate sulfurtransferase | E0F20_12560 | Not Available | Positive | 2563034 - 2563879 | 30621.2 |
| enhanced serine sensitivity protein sseb | E0F20_12565 | Not Available | Negative | 2563923 - 2564699 | 28613.1 |
| aminopeptidase pepb | E0F20_12570 | Not Available | Negative | 2564809 - 2566092 | 46444.0 |
| fe-s cluster assembly protein iscx | E0F20_12575 | Not Available | Negative | 2566154 - 2566354 | 7711.91 |
| isc system 2fe-2s type ferredoxin | E0F20_12580 | Not Available | Negative | 2566366 - 2566701 | 12403.6 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

