Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-SCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
118039 bp
Thymine Count
117524 bp
Guanine Count
108052 bp
Cytosine Count
108269 bp
Genome Length
451884 bp
Protein-coding Genes
4973 genes
Non-Coding Genes
282 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sugar abc transporter substrate-binding protein | E0F20_12485 | Not Available | Negative | 2541094 - 2542023 | 32858.5 |
| inositol 2-dehydrogenase | E0F20_12490 | Not Available | Negative | 2542062 - 2543048 | 36167.0 |
| hypothetical protein | E0F20_12495 | Not Available | Negative | 2543121 - 2543329 | 7804.34 |
| oxidoreductase | E0F20_12500 | Not Available | Negative | 2543383 - 2544417 | 37812.9 |
| mfs transporter | E0F20_12505 | Not Available | Negative | 2544481 - 2546022 | 55550.5 |
| ribosome biogenesis gtpase der | E0F20_12510 | Not Available | Negative | 2546323 - 2547795 | 54994.2 |
| outer membrane protein assembly factor bamb | E0F20_12515 | Not Available | Negative | 2547913 - 2549091 | 41772.4 |
| tetratricopeptide repeat protein | E0F20_12520 | Not Available | Negative | 2549102 - 2549722 | 22135.2 |
| histidine--trna ligase | E0F20_12525 | Not Available | Negative | 2549736 - 2551010 | 47032.2 |
| flavodoxin-dependent (e)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase | E0F20_12530 | Not Available | Negative | 2551121 - 2552239 | 40687.2 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

