Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-SCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
118039 bp
Thymine Count
117524 bp
Guanine Count
108052 bp
Cytosine Count
108269 bp
Genome Length
451884 bp
Protein-coding Genes
4973 genes
Non-Coding Genes
282 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type iv toxin-antitoxin system yeeu family antitoxin | E0F20_12435 | Not Available | Positive | 2523617 - 2523940 | 12083.5 |
| toxin | E0F20_12440 | Not Available | Positive | 2523972 - 2524295 | 12144.6 |
| attachment protein | E0F20_12445 | Not Available | Positive | 2525117 - 2528659 | 126383.0 |
| autotransporter outer membrane beta-barrel domain-containing protein | E0F20_12450 | Not Available | Positive | 2529093 - 2533448 | 152272.0 |
| 5-deoxy-glucuronate isomerase | E0F20_12455 | Not Available | Negative | 2533663 - 2534481 | 30853.3 |
| myo-inosose-2 dehydratase | E0F20_12460 | Not Available | Negative | 2534491 - 2535381 | 32678.9 |
| 5-dehydro-2-deoxygluconokinase | E0F20_12465 | Not Available | Negative | 2535396 - 2537300 | 69937.6 |
| gfo/idh/moca family oxidoreductase | E0F20_12470 | Not Available | Negative | 2537313 - 2538446 | 41241.5 |
| abc transporter permease | E0F20_12475 | Not Available | Negative | 2538455 - 2539483 | 36405.8 |
| sugar abc transporter atp-binding protein | E0F20_12480 | Not Available | Negative | 2539495 - 2541042 | 56339.0 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

