Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-SCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
118039 bp
Thymine Count
117524 bp
Guanine Count
108052 bp
Cytosine Count
108269 bp
Genome Length
451884 bp
Protein-coding Genes
4973 genes
Non-Coding Genes
282 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | E0F20_12385 | Not Available | Positive | 2515990 - 2516361 | 13800.6 |
| hypothetical protein | E0F20_12390 | Not Available | Positive | 2516425 - 2517345 | 34239.2 |
| tat pathway signal sequence | E0F20_12395 | Not Available | Positive | 2517399 - 2518157 | 28216.7 |
| mfs transporter | E0F20_12400 | Not Available | Positive | 2518393 - 2519691 | 46858.0 |
| metal-sensing transcriptional repressor | E0F20_12405 | Not Available | Positive | 2519795 - 2520064 | 10032.0 |
| nickel/cobalt efflux protein rcna | E0F20_12410 | Not Available | Positive | 2520077 - 2521219 | 42093.5 |
| nird/ygiw/ydei family stress tolerance protein | E0F20_12415 | Not Available | Positive | 2521392 - 2521820 | 15981.0 |
| duf945 domain-containing protein | E0F20_12420 | Not Available | Positive | 2522041 - 2522862 | 31165.5 |
| dna repair protein radc | E0F20_12425 | Not Available | Positive | 2522895 - 2523365 | 17949.7 |
| duf987 domain-containing protein | E0F20_12430 | Not Available | Positive | 2523374 - 2523595 | 8415.06 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

