Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-SCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
118039 bp
Thymine Count
117524 bp
Guanine Count
108052 bp
Cytosine Count
108269 bp
Genome Length
451884 bp
Protein-coding Genes
4973 genes
Non-Coding Genes
282 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | E0F20_12330 | Not Available | Positive | 2508944 - 2509039 | 3551.41 |
| diguanylate cyclase | E0F20_12340 | Not Available | Negative | 2509323 - 2510249 | 35271.3 |
| hypothetical protein | E0F20_12345 | Not Available | Positive | 2510645 - 2511223 | 19845.3 |
| duf3944 domain-containing protein | E0F20_12350 | Not Available | Positive | 2511365 - 2512102 | 27230.2 |
| wyl domain-containing protein | E0F20_12355 | Not Available | Positive | 2512122 - 2512808 | 26931.4 |
| hypothetical protein | E0F20_12360 | Not Available | Positive | 2512817 - 2513257 | 16003.6 |
| hypothetical protein | E0F20_12365 | Not Available | Positive | 2513293 - 2513655 | 13083.2 |
| hypothetical protein | E0F20_12370 | Not Available | Positive | 2513999 - 2514364 | 13578.2 |
| hupe/urej family protein | E0F20_12375 | Not Available | Positive | 2514409 - 2515146 | 27102.6 |
| transmembrane anchor protein | E0F20_12380 | Not Available | Positive | 2515160 - 2515849 | 25027.8 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

