Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-SCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
118039 bp
Thymine Count
117524 bp
Guanine Count
108052 bp
Cytosine Count
108269 bp
Genome Length
451884 bp
Protein-coding Genes
4973 genes
Non-Coding Genes
282 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| molecular chaperone | E0F20_12170 | Not Available | Positive | 2477924 - 2478607 | 25228.4 |
| fimbrial biogenesis outer membrane usher protein | E0F20_12175 | Not Available | Positive | 2478594 - 2481071 | 90118.4 |
| fimbrial protein | E0F20_12180 | Not Available | Positive | 2481068 - 2482411 | 47908.9 |
| molecular chaperone | E0F20_12185 | Not Available | Positive | 2482419 - 2483075 | 24038.7 |
| cadc family transcriptional regulator | E0F20_12190 | Not Available | Positive | 2483131 - 2483895 | 29510.4 |
| hypothetical protein | E0F20_12195 | Not Available | Positive | 2484005 - 2484352 | 13159.5 |
| n-acetyltransferase | E0F20_12205 | Not Available | Negative | 2485845 - 2486366 | 19595.6 |
| trans-aconitate 2-methyltransferase | E0F20_12210 | Not Available | Positive | 2486477 - 2487235 | 28957.1 |
| gfa family protein | E0F20_12215 | Not Available | Positive | 2487368 - 2487745 | 13647.7 |
| hypothetical protein | E0F20_12220 | Not Available | Negative | 2487742 - 2488656 | 34840.1 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

